BioFSharp 2.0.0

.NET Standard 2.0 This package targets .NET Standard 2.0. The package is compatible with this framework or higher. 
dotnet add package BioFSharp --version 2.0.0
                    


                    

                
NuGet\Install-Package BioFSharp -Version 2.0.0
This command is intended to be used within the Package Manager Console in Visual Studio, as it uses the NuGet module's version of Install-Package. 
<PackageReference Include="BioFSharp" Version="2.0.0" />
For projects that support PackageReference, copy this XML node into the project file to reference the package. 
<PackageVersion Include="BioFSharp" Version="2.0.0" />
                    


                            Directory.Packages.props
                        

                    

                
<PackageReference Include="BioFSharp" />
                    


                            Project file
For projects that support Central Package Management (CPM), copy this XML node into the solution Directory.Packages.props file to version the package. 
paket add BioFSharp --version 2.0.0
                    


                    

                
#r "nuget: BioFSharp, 2.0.0"
#r directive can be used in F# Interactive and Polyglot Notebooks. Copy this into the interactive tool or source code of the script to reference the package. 
#addin nuget:?package=BioFSharp&version=2.0.0
                    


                            Install BioFSharp as a Cake Addin
                        

                    

                
#tool nuget:?package=BioFSharp&version=2.0.0
                    


                            Install BioFSharp as a Cake Tool

Open source bioinformatics and computational biology toolbox written in F#.

Product Compatible and additional computed target framework versions.
.NET net5.0 was computed.  net5.0-windows was computed.  net6.0 was computed.  net6.0-android was computed.  net6.0-ios was computed.  net6.0-maccatalyst was computed.  net6.0-macos was computed.  net6.0-tvos was computed.  net6.0-windows was computed.  net7.0 was computed.  net7.0-android was computed.  net7.0-ios was computed.  net7.0-maccatalyst was computed.  net7.0-macos was computed.  net7.0-tvos was computed.  net7.0-windows was computed.  net8.0 was computed.  net8.0-android was computed.  net8.0-browser was computed.  net8.0-ios was computed.  net8.0-maccatalyst was computed.  net8.0-macos was computed.  net8.0-tvos was computed.  net8.0-windows was computed.  net9.0 was computed.  net9.0-android was computed.  net9.0-browser was computed.  net9.0-ios was computed.  net9.0-maccatalyst was computed.  net9.0-macos was computed.  net9.0-tvos was computed.  net9.0-windows was computed. 
.NET Core netcoreapp2.0 was computed.  netcoreapp2.1 was computed.  netcoreapp2.2 was computed.  netcoreapp3.0 was computed.  netcoreapp3.1 was computed. 
.NET Standard netstandard2.0 is compatible.  netstandard2.1 was computed. 
.NET Framework net461 was computed.  net462 was computed.  net463 was computed.  net47 was computed.  net471 was computed.  net472 was computed.  net48 was computed.  net481 was computed. 
MonoAndroid monoandroid was computed. 
MonoMac monomac was computed. 
MonoTouch monotouch was computed. 
Tizen tizen40 was computed.  tizen60 was computed. 
Xamarin.iOS xamarinios was computed. 
Xamarin.Mac xamarinmac was computed. 
Xamarin.TVOS xamarintvos was computed. 
Xamarin.WatchOS xamarinwatchos was computed. 
Compatible target framework(s)
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NuGet packages (11)

Showing the top 5 NuGet packages that depend on BioFSharp:

Package Downloads
BioFSharp.IO

Read/write functions for various biological file formats
BioFSharp.ML

Machine learning with BioFSharp and CNTK.Net.
BioFSharp.BioContainers

Open source bioinformatics and computational biology toolbox written in F#.
BioFSharp.Parallel

GPU parallelized functions from BioFSharp
ProteomIQon

ProteomIQon - computational proteomics

GitHub repositories

This package is not used by any popular GitHub repositories.

Version Downloads Last updated
2.0.0 118 4/25/2025
2.0.0-preview.3 1,962 5/11/2022
2.0.0-preview.2 163 2/13/2022
2.0.0-preview.1 184 1/26/2022
2.0.0-beta7 926 9/29/2021
2.0.0-beta6 878 5/10/2021
2.0.0-beta5 1,374 2/16/2021
2.0.0-beta4 5,022 6/24/2020
2.0.0-beta3 1,171 6/22/2020
2.0.0-beta2 1,165 6/22/2020
2.0.0-beta1 1,226 5/6/2020
2.0.0-beta 1,278 4/28/2020
1.2.1-beta2 1,235 4/28/2020
1.2.1-beta1 1,169 4/28/2020
1.2.0 3,170 3/30/2020
1.1.0 1,735 3/23/2020
1.0.3 1,781 2/26/2020
1.0.2 1,809 2/19/2020

The new BioFSharp package now bundles the old BioFSharp and BioFSharp.IO packages.
The whole package has undergone a major rework. it now contains the following modules:
- `BioFSharp` - the core data model e.g. BioItems, Sequences, Alignments, etc.
- `BioFSharp.FileFormats` - data models for and functions to work with biological file formats
- `BioFSharp.CLIArgs` - DSLs for commonly used bioinformatic CLI tools such as BLAST or ClustalO. These DSLs are designed to be extended in the `BioFSharp.BioContainers` package to run the tools in containerized form.
- `BioFSharp.IO` - Parsers and writers for the datatypes defined in `BioFSharp.FileFormats`
- `BioFSharp.CLITools` - functions to execute CLITools using the DSLs defined in `BioFSharp.CLIArgs`
Additions:**
BioFSharp**:
[Breaking] [Conversion extensions for BioCollections]()
[Breaking] [Tagged Sequence and Phylogenetic Tree have been reworked as top level types](https://github.com/CSBiology/BioFSharp/commit/aec8232dd7725cdbb99a038ebe0c99f26922f31a)
[Add functionality to construct phylogenetic trees from clustered data or raw sequence data](https://github.com/CSBiology/BioFSharp/commit/aec8232dd7725cdbb99a038ebe0c99f26922f31a)